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Created attachment 257160 [details] the "about" window and the opened sub-window "installation details" (only visible because "about" is smaller) Since the Upgrade to El Capitan (OSX 10.11) any (eclipse-) menu-window (properties, about eclipse, preferences, ...) opened while eclipse is in fullscreen mode (and only in fullscreen mode) will cause further dialogs/windows to appear behind them. They also move with their parent window causing dialogs/windows that are smaller than their ancestors to stay hidden and cannot be closed with a mouse (only possible with the escape button) tested in 4.4.2 (Luna) and 4.5.0/4.5.1 (Mars, both) and is limited to eclipse (does not happen in other software or even other java-based software like intellij IDEA 14.1.5 for example) guessing SWT, might be something else - did not happen on OSX 10.10.4 with eclipse 4.4.5 or 4.5.0
*** This bug has been marked as a duplicate of bug 478975 ***
I have this problem too.