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The file system content contribution should use the common "Refresh" command definition instead of adding it itself to the tree. 1. Provide a IRefreshHandlerDelegate adapter for the file system tree node types. See the adapter definition in processes.ui as example. 2. Remove the "Refresh" contribution of the file system plugin to the Target Explorer view tree. 3. Update the editor tab tree contribution of "Refresh" to refer to the common command.
Fixed at the commit: http://git.eclipse.org/c/tcf/org.eclipse.tcf.git/commit/?id=e57259e523b8d4b233671a30a91d32ab129eef58