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Build Identifier: 2011-09-28 create two RUI project. delete one project, the org.eclipse.edt.ide.core.prefs file in another project will also be deleted. Reproducible: Always
Yun Feng - this is caused by your change in bug 346269. If I disable SettingUpdateResourceChangeListener the problem goes away.
This is fixed in the change of bug 346269.
verified in 0.7.0.v20111019