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The squiggly line that appears under a warning should be a yellowish color to distinguish it from an error squiggle.
We can do that for you when we merge our changes with your last work in the editor.
Fixed http://git.eclipse.org/c/orion/org.eclipse.orion.client.git/commit/?id=18fc8a90567b53bc441ee94bfb328f6696bbdb44
fixed