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After a change in the SSL certificate of the Git host, EGit no longer works. I am able to run Git commands from the command line, but using EGit I get "Not Authorized" errors when I try to pull or fetch. I've tried deleting my secure store but it did not help. This seems to only affect Windows. org.eclipse.core.runtime.CoreException: <URL REMOVED>.git: not authorized at org.eclipse.egit.ui.internal.fetch.FetchOperationUI.execute(FetchOperationUI.java:102) at org.eclipse.egit.ui.internal.fetch.FetchOperationUI$1.run(FetchOperationUI.java:117) at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54) Caused by: org.eclipse.jgit.errors.TransportException: <URL REMOVED>.git: not authorized at org.eclipse.jgit.transport.TransportHttp.connect(TransportHttp.java:385) at org.eclipse.jgit.transport.TransportHttp.openFetch(TransportHttp.java:215) at org.eclipse.jgit.transport.FetchProcess.executeImp(FetchProcess.java:125) at org.eclipse.jgit.transport.FetchProcess.execute(FetchProcess.java:111) at org.eclipse.jgit.transport.Transport.fetch(Transport.java:903) at org.eclipse.jgit.api.FetchCommand.call(FetchCommand.java:134) at org.eclipse.egit.core.op.FetchOperation.run(FetchOperation.java:128) at org.eclipse.egit.ui.internal.fetch.FetchOperationUI.execute(FetchOperationUI.java:99) ... 2 more