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The view constantly schedules new jobs but has no recollection about its previous jobs. If the user selects two different repositories while the workspace is still doing something, only the last job should run as running the first one would be pointless as its content would just get overridden by the following job. The UI should also opt to ignore updates from jobs that have been cancelled.
Fix proposed: http://egit.eclipse.org/r/4126
Merged as accef75a2d85571af33978f7eef78d557cde2703