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As discussed in bug 348670, if a project is intentionally delivering bundles which can not be signed, for technical reasons, they should specify "do no sign" in an eclipse.inf file, so that other, downstream consumers will not inadvertently sign it. See http://wiki.eclipse.org/JarProcessor_Options
The Eclipselink project has moved to Github: https://github.com/eclipse-ee4j/eclipselink