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I have Subclipse 1.6.17 and EGit 0.12.1 installed on Helios SR2. 1. Choose Team > Show History on a Subclipse project. 2. Right-click a revision. 3. There's a Team menu which seems to be from EGit, with a Rebase... item, and a Rebase submenu.
Pretty sure this got fixed with bug 343574
I agree with Benny.