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On case insensitive operating systems, product branding can result in an executable artifact containing something like Eclipse.app/Contents/MacOS/eclipse and the chmod action being branded eclipse.app/Contents/MacOS/eclipse This is because the branding iron wanted to rename the executable feature's Eclipse.app/Contents/MacOS/launcher to eclipse.app/Contents/MacOS/eclipse but end up with the existing Eclipse.app folder. One fix here would be for BrangP2Task#brandTouchpointData to actually inspect the artifact to see the case used and then update the chmod and ln actions appropriately.
Currently we are not actively enhancing PDE build anymore. Therefore, I close this bug as WONTFIX. Please reopen, if you plan to provide a fix.