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This is one of those really awkward bugs that implicates two projects more or less equally. Here the other project is Buckminster. When a project is resolved through Buckminster using a git repos that has been cloned into the local workspace, "Removed" markers are created. Any time a subsequent resolution happens those markers are recreated for the entire workspace. I just don't have enough knowledge of the internals of either tool to no which one is implicated, sorry. The workaround is to do a hard reset, but that has it's own dangers and doesn't work in the case where you actually need to make changes to artifacts that affect resolution. Then you get into a catch-22 and end up having to simply reconstruct those changes. But mostly I'm concerned that the workspace could end up in some sort of inconsistent state.
cc'ing Thomas in on this.
I don't know what this is about or how to reproduce this with EGit. If the problem still exists, please provide instructions on how to reproduce this.
(In reply to Robin Stocker from comment #2) > I don't know what this is about or how to reproduce this with EGit. If the > problem still exists, please provide instructions on how to reproduce this. That's cool. I actually barely remember myself, and I'm not sure if I'd care if I did. ;-P