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When a Cross GCC toolchain is used, scanner discovery runs before the settings can be updated to include the prefix. I will cut/paste the code that implements the Clear button on the scanner discovery page to clear out the settings.
Fixed.
*** cdt cvs genie on behalf of dschaefer *** Bug 343466 - clear the discovered settings to start over with the prefixed compiler names. Also make sure we add the prefix to all compilers in the config. [*] SetCrossCommandProcess.java 1.3 http://dev.eclipse.org/viewcvs/index.cgi/org.eclipse.cdt/cross/org.eclipse.cdt.build.crossgcc/src/org/eclipse/cdt/build/crossgcc/SetCrossCommandProcess.java?root=Tools_Project&r1=1.2&r2=1.3