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This is a problem I found when testing http://egit.eclipse.org/r/#change,1942 patchset 1. When trying to rebase the two branches in the attached sample repository rebase is aborted due to a conflict detected by EGit/JGit: - checkout branch helloworld - call rebase on master branch from repositories view - EGit aborts the rebase claiming it found a conflict. Trying the same rebase using native git succeeds.
Created attachment 183814 [details] test repository
This error boiles down to the underlying cherry-pick command. You can do the following: - Check out master - Cherry-pick helloworld Native git does this without a conflict, whereas jgit reports a conflict.
Fixed a long time ago in 12a5c8d413baab3f27932a7c850dbfc0407ded78 and 049827d7080201fe24f2728b26d681434327f72a
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