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My application is comprised of several Java projects. I multi-selected the projects, right-clicked and selected "MoDisco > Discover Java model from Java project". I would have expected all the code in the selected projects to be discovered, and a single model to be created. Instead, I got 7 windows that popped-up. One for each project.
To solve this bug we need to enhance the discovery manager. Currently, the discovery manger makes one discoverer launch per selected elements.
To complete, some user alsod tried some JSP model discovery on multi-folders selection. In addition to the fact that he obtained more than one xmi file, some misc issue (multi-threading ?) is that som xmi file contains the random addition of discovery result for several folders (but not all).