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According with the bug 325419, the templates have been modified. Now we can define the visibility of the compartments in the Papyrus preferences. You need to update the plugins org.eclipse.papyrus.codegen and org.eclipse.papyrus.def before regenerating your diagram.
Done in r2828.
ClassClassifier provoked mismatch with ClassComposite and have been remove from GMFGen. This element was not used, moreover, in case Operation, Attribute compartment would be needed on Composite, it would be better to add them directly on the same ClassComposite node (with possible default compartment hiding). Done in r2870. Still some issues remains in templates, PropertyPart has a compartment which visibility cannot be set in preferences.
Compartment visibility is not correctly initialized for Child nodes (ex: create a Class and a Nested Class)
Compartment default visibility fixed for ChildNodes in r2890.
Fixed.