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I'm trying to clone a repository and I am getting a failure because of a MissingObjectException. Message: ----------------- Cloning Git Repository failed Exception Stack Trace: ------------------------- java.lang.reflect.InvocationTargetException at org.eclipse.egit.core.op.CloneOperation.run(CloneOperation.java:129) at org.eclipse.egit.ui.internal.clone.GitCloneWizard$4.run(GitCloneWizard.java:199) at org.eclipse.jface.operation.ModalContext$ModalContextThread.run(ModalContext.java:121) Caused by: org.eclipse.jgit.errors.MissingObjectException: Missing blob 2c3e27753ac40abd22f17d3f9c678d8fa9c8a16a at org.eclipse.jgit.storage.file.WindowCursor.open(WindowCursor.java:96) at org.eclipse.jgit.lib.ObjectDatabase.open(ObjectDatabase.java:176) at org.eclipse.jgit.lib.Repository.open(Repository.java:270) at org.eclipse.jgit.lib.GitIndex.checkoutEntry(GitIndex.java:903) at org.eclipse.jgit.lib.WorkDirCheckout$1.visitEntry(WorkDirCheckout.java:183) at org.eclipse.jgit.lib.IndexTreeWalker.finishVisitTree(IndexTreeWalker.java:205) at org.eclipse.jgit.lib.IndexTreeWalker.walk(IndexTreeWalker.java:142) at org.eclipse.jgit.lib.IndexTreeWalker.walk(IndexTreeWalker.java:120) at org.eclipse.jgit.lib.WorkDirCheckout.checkoutOutIndexNoHead(WorkDirCheckout.java:166) at org.eclipse.jgit.lib.WorkDirCheckout.checkout(WorkDirCheckout.java:143) at org.eclipse.egit.core.op.CloneOperation.doCheckout(CloneOperation.java:224) at org.eclipse.egit.core.op.CloneOperation.run(CloneOperation.java:120) ... 2 more Root exception: org.eclipse.jgit.errors.MissingObjectException: Missing blob 2c3e27753ac40abd22f17d3f9c678d8fa9c8a16a at org.eclipse.jgit.storage.file.WindowCursor.open(WindowCursor.java:96) at org.eclipse.jgit.lib.ObjectDatabase.open(ObjectDatabase.java:176) at org.eclipse.jgit.lib.Repository.open(Repository.java:270) at org.eclipse.jgit.lib.GitIndex.checkoutEntry(GitIndex.java:903) at org.eclipse.jgit.lib.WorkDirCheckout$1.visitEntry(WorkDirCheckout.java:183) at org.eclipse.jgit.lib.IndexTreeWalker.finishVisitTree(IndexTreeWalker.java:205) at org.eclipse.jgit.lib.IndexTreeWalker.walk(IndexTreeWalker.java:142) at org.eclipse.jgit.lib.IndexTreeWalker.walk(IndexTreeWalker.java:120) at org.eclipse.jgit.lib.WorkDirCheckout.checkoutOutIndexNoHead(WorkDirCheckout.java:166) at org.eclipse.jgit.lib.WorkDirCheckout.checkout(WorkDirCheckout.java:143) at org.eclipse.egit.core.op.CloneOperation.doCheckout(CloneOperation.java:224) at org.eclipse.egit.core.op.CloneOperation.run(CloneOperation.java:120) at org.eclipse.egit.ui.internal.clone.GitCloneWizard$4.run(GitCloneWizard.java:199) at org.eclipse.jface.operation.ModalContext$ModalContextThread.run(ModalContext.java:121) Session Data ------------- eclipse.buildId=I20100608-0911 java.version=1.6.0_20 java.vendor=Sun Microsystems Inc. BootLoader constants: OS=win32, ARCH=x86_64, WS=win32, NL=en_US Framework arguments: -product org.eclipse.epp.package.php.product Command-line arguments: -data C:\tmp -os win32 -ws win32 -arch x86_64 -product org.eclipse.epp.package.php.product Ran 'git fsck' on the a repository clone on the same laptop and got the following: dangling commit 9d548c1d0bb621a59110ab2ccd5b2df3fa907f8a dangling blob 6c96742eb21b04a571997763193e55cf941fd912 dangling blob 8dfc4c3aa32df52b1f3530272618fa1e54a19ec9 dangling commit 8e2eb54d705aaae996221df5620912d782193b0b dangling commit 69978ebeb83b12caece5226757f3515de3f31bf7 dangling commit 80b896eb7e99515d38605bd5f2a634fc3a349156 dangling tree a8f6af1199d0ce0d43c42ccb8ff2e92eed95a328
Does the clone work with native git? Is the repo public so that we can try to reproduce it?
sorry, not a public repo. As a workaround I am using git in cygwin and it is working, so yes, it is working with native git. It also works on my linux dev machine.
I keep updating and trying again. Now the failure is a bit more specific and is citing a missing blob. Is that an unrecoverable failure? Seems the command line utils are able to handle it. Details below: EGit Version: 0.10.0.201009270918 JGit Version: 0.10.0.201009270915 Problem Occurred ----------------- 'Cloning from ssh://username@my.host.com/path/repos has encountered a problem. Missing blob 2c3e27753ac40abd22f17d3f9c678d8fa9c8a16a From the error log ---------------------- Message: Missing blob 2c3e27753ac40abd22f17d3f9c678d8fa9c8a16a Exception Stack Trace: org.eclipse.jgit.errors.MissingObjectException: Missing blob 2c3e27753ac40abd22f17d3f9c678d8fa9c8a16a at org.eclipse.jgit.storage.file.WindowCursor.open(WindowCursor.java:112) at org.eclipse.jgit.lib.ObjectDatabase.open(ObjectDatabase.java:176) at org.eclipse.jgit.lib.Repository.open(Repository.java:274) at org.eclipse.jgit.lib.GitIndex.checkoutEntry(GitIndex.java:937) at org.eclipse.jgit.lib.WorkDirCheckout$1.visitEntry(WorkDirCheckout.java:187) at org.eclipse.jgit.lib.IndexTreeWalker.finishVisitTree(IndexTreeWalker.java:205) at org.eclipse.jgit.lib.IndexTreeWalker.walk(IndexTreeWalker.java:142) at org.eclipse.jgit.lib.IndexTreeWalker.walk(IndexTreeWalker.java:120) at org.eclipse.jgit.lib.WorkDirCheckout.checkoutOutIndexNoHead(WorkDirCheckout.java:166) at org.eclipse.jgit.lib.WorkDirCheckout.checkout(WorkDirCheckout.java:143) at org.eclipse.egit.core.op.CloneOperation.doCheckout(CloneOperation.java:231) at org.eclipse.egit.core.op.CloneOperation.run(CloneOperation.java:120) at org.eclipse.egit.ui.internal.clone.GitCloneWizard.executeCloneOperation(GitCloneWizard.java:249) at org.eclipse.egit.ui.internal.clone.GitCloneWizard.access$3(GitCloneWizard.java:242) at org.eclipse.egit.ui.internal.clone.GitCloneWizard$4.run(GitCloneWizard.java:223) at org.eclipse.core.internal.jobs.Worker.run(Worker.java:54) Session Data: eclipse.buildId=M20100909-0800 java.version=1.6.0_20 java.vendor=Sun Microsystems Inc. BootLoader constants: OS=win32, ARCH=x86_64, WS=win32, NL=en_US Framework arguments: -product org.eclipse.epp.package.php.product Command-line arguments: -data C:\tmp -os win32 -ws win32 -arch x86_64 -product org.eclipse.epp.package.php.product
Can you reproduce the issue with EGit 1.0? In the meantime the implementation totally changed (GitIndex is no longer used).
I am no longer getting the error message with 1.0. It appears to be working although I am having some difficulty figuring out how to create/import a project.
