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3.2 RC1 There is currently no way exposed in the UI that allows me to purge (delete/remove/clean) all markers for a resource (container/project). Sometimes it happens that I modify the ".project" files and remove builders or natures that I just tried previously and decided to drop for this project. If I then perform a "Project -> Clean..." not all markers are deleted. For example, I had a WTP project and decided to remove the WTP natures and builders. After cleaning the project I still have a WTP error marker indicating a missing runtime.
*** This bug has been marked as a duplicate of 136337 ***